SNP Profiles matching RB 37

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 Key

 1234567891011121314
_Input profile
GGAACCGGTTGGAACCAAGGAGCCCCGG
1._GC-01-043-2-20
GGAACCGGTTGGAACCAAGGAGCCCCGG
2._RB_37_[BRA]
GGAACCGGTTGGAATTAAGGAGCCCCGG
3._RB_37_[BRA]
GGAACCGGTTGGAATTAAGGAGCCCCGG
4._RB_37_[BRA]
GGAACCGGTTGGAATTAAGGAGCCCCGG
5._RB_37_[BRA]
GGAACCGGTTGGAATTAAGGAGCCCCGG
6._RB_37_[BRA]
GGAACCGGTTGGAATTAAGGAGCCCCGG
7._RB_37_[BRA]
GGAACCGGTTGGAATTAAGGAGCCCCGG
8._RB_37_[BRA]
GGAACCGGTTGGAATTAAGGAGCCCCGG
9._RB_37_[BRA]
GGAACCGGTTGGAATTAAGGAGCCCCGG
10._RB_37_[BRA]
GGAACCGGTTGGAATTAAGGAGCCCCGG
11._RB_37_[BRA]
GGAACCGGTTGGAATTAAGGAGCCCCGG
12._GC-01-043-2-20
GGAACCGGTTGGAATTAAGGAGCCCCGG
13._GC-01-043-2-20
GGAACCGGTTGGAATTAAGGAGCCCCGG
14._GC-01-043-2-20
GGAACCGGTTGGAATTAAGGAGCCCCGG
15._GC-01-043-2-20
GGAACCGGTTGGAATTAAGGAGCCCCGG
16._GC-01-043-2-20
GGAACCGGTTGGAATTAAGGAGCCCCGG
17._GC-01-043-2-20
GGAACCGGTTGGAATTAAGGAGCCCCGG
18._GC-01-043-2-20
GGAACCGGTTGGAATTAAGGAGCCCCGG
19._GC-01-043-2-20
GGAACCGGTTGGAATTAAGGAGCCCCGG
20._GC-01-043-2-20
GGAACCGGTTGGAATTAAGGAGCCCCGG
21._GC-01-043-2-20
GGAACCGGTTGGAATTAAGGAGCCCCGG
22._RB_39_[BRA]
GGAACCGG__AATTAA_AGCCCCGG
23._RB_39_[BRA]
GGAACCGGTT_AATTAAGG_CCCC_
24._RB_39_[BRA]
GGAAACGGCTGGAACTAAGGAGACCCGG
25._GC-01-042-2-19
GGAAACGGCTGGAACTAAGGAGACCCGG
 1516171819202122232425262728
_Input profile
GGACCCAAGGGGTTTTGGAACCAACCGG
1._GC-01-043-2-20
GGACCCAAGGGGTTTTGGAACCAACCGG
2._RB_37_[BRA]
GGACCCAAGGGGTTTTGGAACCAACCGG
3._RB_37_[BRA]
GGACCCAAGGGGTTTTGGAACCAACCGG
4._RB_37_[BRA]
GGACCCAAGGGGTTTTGGAACCAACCGG
5._RB_37_[BRA]
GGACCCAAGGGGTTTTGGAACCAACCGG
6._RB_37_[BRA]
GGACCCAAGGGGTTTTGGAACCAACCGG
7._RB_37_[BRA]
GGACCCAAGGGGTTTTGGAACCAACCGG
8._RB_37_[BRA]
GGACCCAAGGGGTTTTGGAACCAACCGG
9._RB_37_[BRA]
GGACCCAAGGGGTTTTGGAACCAACCGG
10._RB_37_[BRA]
GGACCCAAGGGGTTTTGGAACCAACCGG
11._RB_37_[BRA]
GGACCCAAGGGGTTTTGGAACCAACCGG
12._GC-01-043-2-20
GGACCCAAGGGGTTTTGGAACCAACCGG
13._GC-01-043-2-20
GGACCCAAGGGGTTTTGGAACCAACCGG
14._GC-01-043-2-20
GGACCCAAGGGGTTTTGGAACCAACCGG
15._GC-01-043-2-20
GGACCCAAGGGGTTTTGGAACCAACCGG
16._GC-01-043-2-20
GGACCCAAGGGGTTTTGGAACCAACCGG
17._GC-01-043-2-20
GGACCCAAGGGGTTTTGGAACCAACCGG
18._GC-01-043-2-20
GGACCCAAGGGGTTTTGGAACCAACCGG
19._GC-01-043-2-20
GGACCCAAGGGGTTTTGGAACCAACCGG
20._GC-01-043-2-20
GGACCCAAGGGGTTTTGGAACCAACCGG
21._GC-01-043-2-20
GGACCCAAGGGGTTTTGGAACCAACCGG
22._RB_39_[BRA]
GGACCCAAGGGGTTTTGGAACCAACCGG
23._RB_39_[BRA]
GGACCCAAGGGGTTTTGG_CC__GG
24._RB_39_[BRA]
GGACCCAAGGGGTTTT_AACCAA_GG
25._GC-01-042-2-19
GGACCCAAGGGGTTTT_AACCAA_GG
 2930313233343536373839   
_Input profile
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
1._GC-01-043-2-20
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
2._RB_37_[BRA]
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
3._RB_37_[BRA]
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
4._RB_37_[BRA]
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
5._RB_37_[BRA]
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
6._RB_37_[BRA]
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
7._RB_37_[BRA]
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
8._RB_37_[BRA]
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
9._RB_37_[BRA]
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
10._RB_37_[BRA]
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
11._RB_37_[BRA]
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
12._GC-01-043-2-20
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
13._GC-01-043-2-20
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
14._GC-01-043-2-20
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
15._GC-01-043-2-20
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
16._GC-01-043-2-20
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
17._GC-01-043-2-20
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
18._GC-01-043-2-20
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
19._GC-01-043-2-20
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
20._GC-01-043-2-20
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
21._GC-01-043-2-20
AATTCTGGTTAACTCCCCAACCX_XX_XX_X
22._RB_39_[BRA]
AA_CTGGTTAACTCCCCAACCX_XX_XX_X
23._RB_39_[BRA]
AA_CTGGTTAACTCCCCAA_X_XX_XX_X
24._RB_39_[BRA]
AATTTTGGTTAACCCCCCAACCX_XX_XX_X
25._GC-01-042-2-19
AATTTTGGTTAACCCCCCAACCX_XX_XX_X

Input profile: RB_37_[BRA]

 
Mars Center for Cocoa Science, Brazil
Location: 1216 2 > FP
 Dapeng Zhang, 2016

1._RB_37_[BRA] GC-01-043-2-20

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

2._RB_37_[BRA]

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1216 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

3._RB_37_[BRA]

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1216 6
 Dapeng Zhang, 2016

4._RB_37_[BRA]

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1216 8
 Dapeng Zhang, 2016

5._RB_37_[BRA]

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1216 10
 Dapeng Zhang, 2016

6._RB_37_[BRA]

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1216 13
 Dapeng Zhang, 2016

7._RB_37_[BRA]

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1216 15
 Dapeng Zhang, 2016

8._RB_37_[BRA]

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1216 16
 Dapeng Zhang, 2016

9._RB_37_[BRA]

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1216 11 > F
 Dapeng Zhang, 2016

10._RB_37_[BRA]

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1216 14 > F
 Dapeng Zhang, 2016

11._RB_37_[BRA]

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1216 9 > FP
 Dapeng Zhang, 2016

12._RB_37_[BRA] GC-01-043-2-20

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

13._RB_37_[BRA] GC-01-043-2-20

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

14._RB_37_[BRA] GC-01-043-2-20

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

15._RB_37_[BRA] GC-01-043-2-20

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP1
 Mars, 2018

16._RB_37_[BRA] GC-01-043-2-20

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

17._RB_37_[BRA] GC-01-043-2-20

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP3
 Mars, 2018

18._RB_37_[BRA] GC-01-043-2-20

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

19._RB_37_[BRA] GC-01-043-2-20

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14 > FP4
 Mars, 2018

20._RB_37_[BRA] GC-01-043-2-20

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

21._RB_37_[BRA] GC-01-043-2-20

97.4 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

22._RB_39_[BRA]

97.1 %
35 shared markers

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

23._RB_39_[BRA]

96.8 %
31 shared markers

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

24._RB_39_[BRA]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1215 12 > F
 Dapeng Zhang, 2016

25._RB_39_[BRA] GC-01-042-2-19

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP4
 Mars, 2018

 


  Key to SNP Markers

1TcSNP25 2TcSNP32 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP226 7TcSNP230 8TcSNP242 9TcSNP372 10TcSNP429
11TcSNP469 12TcSNP529 13TcSNP534 14TcSNP560 15TcSNP577
16TcSNP591 17TcSNP619 18TcSNP645 19TcSNP723 20TcSNP872
21TcSNP891 22TcSNP917 23TcSNP929 24TcSNP953 25TcSNP994
26TcSNP998 27TcSNP1060 28TcSNP1062 29TcSNP1075 30TcSNP1144
31TcSNP1165 32TcSNP1253 33TcSNP1270 34TcSNP1350 35TcSNP1414
36TcSNP1442 37TcSNP1458 38TcSNP1484 39TcSNP1520